BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038A04LP1|AL430466
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1234 1754 0.0
>3x_Contig1234
Length = 5871
Score = 1754 bits (878), Expect = 0.0
Identities = 910/928 (98%)
Strand = Plus / Plus
Query: 1 gatcaaagatatctttgtggaagaagtcaaaagatcagaattttggagtatcaaatgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 gatcaaagatatctttgtggaagaagtcaaaagatcagaattttggagtatcaaatgatg 1564
Query: 61 catattatgagaactctatctcagttactatttagttactaattaacaaatattgtacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 catattatgagaactctatctcagttactatttagttactaattaacaaatattgtacta 1624
Query: 121 gactgcccttatttaattgaatacgatatattattcttcaacatcagtatttaggaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1625 gactgcccttatttaattgaatacgatatattattcttcaacatcagtatttaggaatca 1684
Query: 181 caggttgtttgaatgtggaatggctaattaataataataatagtaatrgkgrkakagggg 240
||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 1685 caggttgtttgaatgtggaatggctaattaataataataatagtaataatgatataataa 1744
Query: 241 grgcrrgcgatgataattaaagagatataatararvagtgttggtgaaatgcagtgatag 300
| |||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1745 taacaagcgatgataattaaagagatataataaaaaagtgttggtgaaatgcagtgatag 1804
Query: 301 ttgtgtatagggtaatagttatatccttcctcttacagtctaatttactagtaggaacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1805 ttgtgtatagggtaatagttatatccttcctcttacagtctaatttactagtaggaacgt 1864
Query: 361 ccgaacatacagtaagttttagcaagacgagtacatttgacacacttttgaccaggtttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1865 ccgaacatacagtaagttttagcaagacgagtacatttgacacacttttgaccaggtttt 1924
Query: 421 agagttggttggttgaatggaatacataaggatttagcacccatagatggggacttatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1925 agagttggttggttgaatggaatacataaggatttagcacccatagatggggacttatca 1984
Query: 481 tcgacttcaatctcttcaccgtcatccttcttagcagaagcatctttaatatcttcttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1985 tcgacttcaatctcttcaccgtcatccttcttagcagaagcatctttaatatcttcttca 2044
Query: 541 cattcttcgacaccacaccatggggacaagataacgttcttcttgttcaaagctggaacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2045 cattcttcgacaccacaccatggggacaagataacgttcttcttgttcaaagctggaacg 2104
Query: 601 aaatccttccattcatcaacaatgactctatgagtgtcgaataattccttagccttgttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2105 aaatccttccattcatcaacaatgactctatgagtgtcgaataattccttagccttgttg 2164
Query: 661 aacaaatcttgttgtaattcttctaagatttctgggattctcttttccaaatcgttaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2165 aacaaatcttgttgtaattcttctaagatttctgggattctcttttccaaatcgttaaga 2224
Query: 721 gaaacaacaatcttcttaccatcgtttctcctaacacaagtaacttgttccttttccaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2225 gaaacaacaatcttcttaccatcgtttctcctaacacaagtaacttgttccttttccaaa 2284
Query: 781 tcctttggaccaagctcaatacgtaatggaatacccttcaattcgtattgagagaacttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2285 tcctttggaccaagctcaatacgtaatggaatacccttcaattcgtattgagagaacttc 2344
Query: 841 caacctggagtgtagttatcgttgtaatcaccaaaggctctgataccagccttcttcaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2345 caacctggagtgtagttatcgttgtaatcaccaaaggctctgataccagccttcttcaat 2404
Query: 901 ctagattcgatggctctggcattttcat 928
||||||||||||||||||||||||||||
Sbjct: 2405 ctagattcgatggctctggcattttcat 2432
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8338
Number of Sequences: 1807
Number of extensions: 8338
Number of successful extensions: 156
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)